Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf31Q8CCF0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Gm12218-201ENSMUST00000117666 399 ntBASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Gm26134-201ENSMUST00000178484 110 ntBASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Mir6407-201ENSMUST00000184510 101 ntBASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Gm28324-201ENSMUST00000187913 264 ntBASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Gm38210-201ENSMUST00000191944 809 ntBASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Gm8197-202ENSMUST00000193422 934 ntBASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Gm30671-201ENSMUST00000214898 318 ntBASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Prpf31Q8CCF0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Gm15617-201ENSMUST00000118973 771 ntBASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Gm8302-201ENSMUST00000119217 852 ntBASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Gm8194-201ENSMUST00000159783 859 ntBASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Gm5100-201ENSMUST00000195631 589 ntBASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.4□□□□□ -0.42
Prpf31Q8CCF0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms