Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Gm27530-201ENSMUST00000184096 98 ntBASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp2bQ8BJF9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Mir7677-201ENSMUST00000184226 67 ntBASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Gm37259-201ENSMUST00000193903 849 ntBASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Gm37666-201ENSMUST00000194110 866 ntBASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms