Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc40Q8BI79 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Gm11500-201ENSMUST00000118237 601 ntBASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Gm16505-201ENSMUST00000179981 232 ntBASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Gm4857-201ENSMUST00000192718 785 ntBASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Gm5714-201ENSMUST00000197343 566 ntBASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Gm45186-201ENSMUST00000206874 478 ntBASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 AC115891.3-201ENSMUST00000219161 2472 ntBASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc40Q8BI79 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Gm11783-201ENSMUST00000119549 885 ntBASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Gm25881-201ENSMUST00000157783 103 ntBASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 CT009601.1-201ENSMUST00000225567 2705 ntBASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Gm37057-201ENSMUST00000192624 1916 ntBASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ccdc40Q8BI79 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Gm10417-201ENSMUST00000194341 3522 ntBASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc40Q8BI79 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms