Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
ParpbpQ6IRT3 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Gm9062-201ENSMUST00000117712 727 ntBASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Gm15595-201ENSMUST00000120840 961 ntBASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Gm23699-201ENSMUST00000158835 135 ntBASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Gm3150-201ENSMUST00000166418 204 ntBASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Gm37986-201ENSMUST00000193285 383 ntBASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Spcs1-203ENSMUST00000226374 592 ntBASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Ginm1-202ENSMUST00000065124 300 ntBASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
ParpbpQ6IRT3 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ParpbpQ6IRT3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms