Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Atf7-201ENSMUST00000096143 390 ntBASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Gm16518-201ENSMUST00000117960 508 ntBASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Gm5274-201ENSMUST00000182641 1003 ntBASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smarca2Q6DIC0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Smarca2Q6DIC0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Smarca2Q6DIC0 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Smarca2Q6DIC0 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC19.39■□□□□ 0.7
Smarca2Q6DIC0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarca2Q6DIC0 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarca2Q6DIC0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarca2Q6DIC0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Smarca2Q6DIC0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarca2Q6DIC0 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarca2Q6DIC0 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smarca2Q6DIC0 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC19.39■□□□□ 0.69
Smarca2Q6DIC0 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smarca2Q6DIC0 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Smarca2Q6DIC0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarca2Q6DIC0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Smarca2Q6DIC0 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Gm18862-201ENSMUST00000204643 933 ntBASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Gm23458-201ENSMUST00000083257 169 ntBASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarca2Q6DIC0 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Gm44806-201ENSMUST00000205574 2303 ntBASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Mir3091-201ENSMUST00000175086 76 ntBASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Gm5311-201ENSMUST00000203518 709 ntBASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 AC102327.1-201ENSMUST00000226389 742 ntBASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 AC167565.1-201ENSMUST00000226980 1833 ntBASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Gm43482-201ENSMUST00000202797 1861 ntBASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarca2Q6DIC0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
Smarca2Q6DIC0 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarca2Q6DIC0 Gm12397-201ENSMUST00000117674 615 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms