Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Gli3Q61602 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC14.88□□□□□ -0.03
Gli3Q61602 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC14.88□□□□□ -0.03
Gli3Q61602 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC14.88□□□□□ -0.03
Gli3Q61602 Gm7210-201ENSMUST00000209309 1067 ntBASIC14.88□□□□□ -0.03
Gli3Q61602 Gm7997-201ENSMUST00000210546 980 ntBASIC14.88□□□□□ -0.03
Gli3Q61602 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC14.88□□□□□ -0.03
Gli3Q61602 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Gli3Q61602 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.88□□□□□ -0.03
Gli3Q61602 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.88□□□□□ -0.03
Gli3Q61602 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Gli3Q61602 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Gli3Q61602 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gli3Q61602 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Gli3Q61602 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Gli3Q61602 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Gm14276-201ENSMUST00000117941 720 ntBASIC14.87□□□□□ -0.03
Gli3Q61602 Gm25319-201ENSMUST00000122552 325 ntBASIC14.87□□□□□ -0.03
Gli3Q61602 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC14.87□□□□□ -0.03
Gli3Q61602 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Gli3Q61602 n-R5s5-201ENSMUST00000083134 119 ntBASIC14.87□□□□□ -0.03
Gli3Q61602 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.87□□□□□ -0.03
Gli3Q61602 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Gli3Q61602 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Gli3Q61602 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Gli3Q61602 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Gli3Q61602 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gli3Q61602 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 Gm13792-201ENSMUST00000121350 423 ntBASIC14.86□□□□□ -0.03
Gli3Q61602 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC14.86□□□□□ -0.03
Gli3Q61602 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC14.86□□□□□ -0.03
Gli3Q61602 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC14.86□□□□□ -0.03
Gli3Q61602 Gm20281-201ENSMUST00000188225 267 ntBASIC14.86□□□□□ -0.03
Gli3Q61602 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Gli3Q61602 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Gli3Q61602 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 Gm13135-201ENSMUST00000117628 3121 ntBASIC14.86□□□□□ -0.03
Gli3Q61602 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Gli3Q61602 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC14.86□□□□□ -0.03
Gli3Q61602 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 AC134898.1-201ENSMUST00000223738 1836 ntBASIC14.86□□□□□ -0.03
Gli3Q61602 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Gli3Q61602 Gm4865-201ENSMUST00000196284 1309 ntBASIC14.86□□□□□ -0.03
Gli3Q61602 Fhl3-202ENSMUST00000106199 1139 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Gli3Q61602 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gli3Q61602 Gm12415-201ENSMUST00000141637 512 ntTSL 3 BASIC14.85□□□□□ -0.03
Gli3Q61602 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC14.85□□□□□ -0.03
Gli3Q61602 Gm23563-201ENSMUST00000174900 251 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms