Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sox17Q61473 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sox17Q61473 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Sox17Q61473 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Sox17Q61473 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.57□□□□□ -0.72
Sox17Q61473 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.57□□□□□ -0.72
Sox17Q61473 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.57□□□□□ -0.72
Sox17Q61473 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.57□□□□□ -0.72
Sox17Q61473 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.57□□□□□ -0.72
Sox17Q61473 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Sox17Q61473 Gm3096-201ENSMUST00000185770 364 ntBASIC10.57□□□□□ -0.72
Sox17Q61473 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.57□□□□□ -0.72
Sox17Q61473 Gm19309-201ENSMUST00000218295 205 ntBASIC10.57□□□□□ -0.72
Sox17Q61473 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.57□□□□□ -0.72
Sox17Q61473 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.57□□□□□ -0.72
Sox17Q61473 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Sox17Q61473 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Sox17Q61473 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Sox17Q61473 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.57□□□□□ -0.72
Sox17Q61473 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sox17Q61473 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sox17Q61473 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.57□□□□□ -0.72
Sox17Q61473 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sox17Q61473 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sox17Q61473 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Sox17Q61473 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sox17Q61473 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Sox17Q61473 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Sox17Q61473 Gm11425-201ENSMUST00000119608 498 ntBASIC10.56□□□□□ -0.72
Sox17Q61473 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.56□□□□□ -0.72
Sox17Q61473 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.56□□□□□ -0.72
Sox17Q61473 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Gm9797-202ENSMUST00000218003 294 ntBASIC10.56□□□□□ -0.72
Sox17Q61473 Gm9396-201ENSMUST00000076703 567 ntBASIC10.56□□□□□ -0.72
Sox17Q61473 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sox17Q61473 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sox17Q61473 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sox17Q61473 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sox17Q61473 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sox17Q61473 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sox17Q61473 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC10.55□□□□□ -0.72
Sox17Q61473 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sox17Q61473 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Sox17Q61473 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.55□□□□□ -0.72
Sox17Q61473 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sox17Q61473 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sox17Q61473 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sox17Q61473 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.55□□□□□ -0.72
Sox17Q61473 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms