Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps54Q5SPW0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Gm8302-201ENSMUST00000119217 852 ntBASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Mir6998-201ENSMUST00000183343 64 ntBASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Mir6407-201ENSMUST00000184510 101 ntBASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Gm10752-201ENSMUST00000218348 729 ntBASIC13.57□□□□□ -0.24
Vps54Q5SPW0 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.57□□□□□ -0.24
Vps54Q5SPW0 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.57□□□□□ -0.24
Vps54Q5SPW0 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vps54Q5SPW0 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.57□□□□□ -0.24
Vps54Q5SPW0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Gm29358-202ENSMUST00000187941 3227 ntBASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Gm22846-201ENSMUST00000157706 270 ntBASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Gm25554-201ENSMUST00000158075 113 ntBASIC13.56□□□□□ -0.24
Vps54Q5SPW0 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Gm27438-201ENSMUST00000183480 110 ntBASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Gm42867-201ENSMUST00000202995 469 ntBASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.56□□□□□ -0.24
Vps54Q5SPW0 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 AC102569.1-201ENSMUST00000221563 685 ntBASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Vps54Q5SPW0 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Vps54Q5SPW0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms