Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Gm12407-201ENSMUST00000180219 324 ntBASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Gm44136-201ENSMUST00000203819 1106 ntBASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Gm5996-201ENSMUST00000211110 718 ntBASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Gm12463-201ENSMUST00000118271 849 ntBASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Gm15595-201ENSMUST00000120840 961 ntBASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Gm29199-201ENSMUST00000187766 775 ntBASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Gm7504-201ENSMUST00000201449 424 ntBASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Gm5363-201ENSMUST00000211927 938 ntBASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.72□□□□□ -0.85
Trav5d-4Q5R1F6 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Trav5d-4Q5R1F6 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav5d-4Q5R1F6 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Trav5d-4Q5R1F6 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Trav5d-4Q5R1F6 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav5d-4Q5R1F6 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav5d-4Q5R1F6 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav5d-4Q5R1F6 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav5d-4Q5R1F6 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav5d-4Q5R1F6 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms