Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gm12274-201ENSMUST00000120062 385 ntBASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gm11244-201ENSMUST00000121243 237 ntBASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gm19046-201ENSMUST00000221263 1298 ntBASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gm18210-201ENSMUST00000209001 1524 ntBASIC14.09□□□□□ -0.15
Usp48Q3V0C5 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp48Q3V0C5 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp48Q3V0C5 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Gm15610-201ENSMUST00000120584 195 ntBASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Gm18776-201ENSMUST00000188833 654 ntBASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Gm5513-201ENSMUST00000072982 1218 ntBASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.08□□□□□ -0.16
Usp48Q3V0C5 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp48Q3V0C5 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Gm18294-201ENSMUST00000176980 1748 ntBASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms