Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Gm37688-201ENSMUST00000195195 465 ntBASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Mir341-201ENSMUST00000093593 96 ntBASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sf3b2Q3UJB0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Gm15626-201ENSMUST00000117478 868 ntBASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Gm14829-201ENSMUST00000121499 1138 ntBASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Mir1941-201ENSMUST00000157834 83 ntBASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Olfml3-204ENSMUST00000169286 874 ntBASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Gm7928-201ENSMUST00000181249 701 ntBASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Gm27316-201ENSMUST00000184884 277 ntBASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Gm4753-201ENSMUST00000188327 1255 ntBASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Gm8643-201ENSMUST00000195228 625 ntBASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Gm43106-201ENSMUST00000199485 637 ntBASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Gm42689-201ENSMUST00000202403 404 ntBASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Gm43966-201ENSMUST00000203301 612 ntBASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 AC140314.1-201ENSMUST00000219549 554 ntBASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sf3b2Q3UJB0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Gm23062-201ENSMUST00000102349 110 ntBASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Gm11473-201ENSMUST00000118980 359 ntBASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Mir8091-201ENSMUST00000183602 139 ntBASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Gm19927-201ENSMUST00000185792 781 ntBASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Gm37858-201ENSMUST00000192759 1231 ntBASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Gm3635-201ENSMUST00000212314 354 ntBASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Gm6653-201ENSMUST00000218063 1288 ntBASIC14.66□□□□□ -0.06
Sf3b2Q3UJB0 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms