Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Gm13286-201ENSMUST00000117750 537 ntBASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Gm8152-201ENSMUST00000120842 637 ntBASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Gm26313-201ENSMUST00000157770 308 ntBASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 AC159810.1-201ENSMUST00000214838 1480 ntBASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.7□□□□□ -0.38
Pdlim7Q3TJD7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Gm12986-201ENSMUST00000119037 967 ntBASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Gm16305-201ENSMUST00000140747 556 ntBASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Mir6387-201ENSMUST00000184042 108 ntBASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Ighv5-8-202ENSMUST00000191967 337 ntBASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Gm19918-201ENSMUST00000194858 400 ntBASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 AC107763.1-201ENSMUST00000226082 1365 ntBASIC12.69□□□□□ -0.38
Pdlim7Q3TJD7 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Olfml3-204ENSMUST00000169286 874 ntBASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pdlim7Q3TJD7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 135.2 ms