Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm20614-201ENSMUST00000177106 632 ntBASIC12.26□□□□□ -0.45
Col9a2Q07643 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Gm43671-201ENSMUST00000200422 433 ntBASIC12.26□□□□□ -0.45
Col9a2Q07643 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.26□□□□□ -0.45
Col9a2Q07643 Gm44814-201ENSMUST00000207018 434 ntBASIC12.26□□□□□ -0.45
Col9a2Q07643 Gm9102-201ENSMUST00000219250 465 ntBASIC12.26□□□□□ -0.45
Col9a2Q07643 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.26□□□□□ -0.45
Col9a2Q07643 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col9a2Q07643 Mir483-201ENSMUST00000093631 73 ntBASIC12.26□□□□□ -0.45
Col9a2Q07643 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.26□□□□□ -0.45
Col9a2Q07643 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.26□□□□□ -0.45
Col9a2Q07643 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.26□□□□□ -0.45
Col9a2Q07643 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col9a2Q07643 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col9a2Q07643 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.25□□□□□ -0.45
Col9a2Q07643 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Gm25562-201ENSMUST00000104608 133 ntBASIC12.25□□□□□ -0.45
Col9a2Q07643 Gm8302-201ENSMUST00000119217 852 ntBASIC12.25□□□□□ -0.45
Col9a2Q07643 Gm11980-201ENSMUST00000121445 986 ntBASIC12.25□□□□□ -0.45
Col9a2Q07643 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.25□□□□□ -0.45
Col9a2Q07643 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.25□□□□□ -0.45
Col9a2Q07643 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.25□□□□□ -0.45
Col9a2Q07643 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.25□□□□□ -0.45
Col9a2Q07643 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Col9a2Q07643 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.25□□□□□ -0.45
Col9a2Q07643 Gm20414-201ENSMUST00000172918 646 ntBASIC12.25□□□□□ -0.45
Col9a2Q07643 Snord55-201ENSMUST00000174939 79 ntBASIC12.25□□□□□ -0.45
Col9a2Q07643 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Col9a2Q07643 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Col9a2Q07643 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Col9a2Q07643 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Col9a2Q07643 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.25□□□□□ -0.45
Col9a2Q07643 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.25□□□□□ -0.45
Col9a2Q07643 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Gm35713-201ENSMUST00000210516 199 ntBASIC12.25□□□□□ -0.45
Col9a2Q07643 Gm9487-201ENSMUST00000216600 472 ntBASIC12.25□□□□□ -0.45
Col9a2Q07643 Gm4604-201ENSMUST00000025040 390 ntBASIC12.25□□□□□ -0.45
Col9a2Q07643 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Gm8181-201ENSMUST00000062242 669 ntBASIC12.25□□□□□ -0.45
Col9a2Q07643 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.25□□□□□ -0.45
Col9a2Q07643 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.25□□□□□ -0.45
Col9a2Q07643 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Col9a2Q07643 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Col9a2Q07643 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.25□□□□□ -0.45
Col9a2Q07643 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Col9a2Q07643 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Col9a2Q07643 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col9a2Q07643 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.25□□□□□ -0.45
Col9a2Q07643 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col9a2Q07643 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.24□□□□□ -0.45
Col9a2Q07643 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Col9a2Q07643 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.24□□□□□ -0.45
Col9a2Q07643 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Gm11560-201ENSMUST00000117567 948 ntBASIC12.24□□□□□ -0.45
Col9a2Q07643 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a2Q07643 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms