Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC8.8□□□□□ -1
Cdx4Q07424 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Gm19972-201ENSMUST00000218180 5664 ntBASIC8.8□□□□□ -1
Cdx4Q07424 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC8.8□□□□□ -1
Cdx4Q07424 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Gm5859-201ENSMUST00000165401 2324 ntBASIC8.8□□□□□ -1
Cdx4Q07424 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cdx4Q07424 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cdx4Q07424 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cdx4Q07424 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Cdx4Q07424 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Cdx4Q07424 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Cdx4Q07424 AC153506.1-201ENSMUST00000218768 2915 ntBASIC8.79□□□□□ -1
Cdx4Q07424 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
Cdx4Q07424 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC8.79□□□□□ -1
Cdx4Q07424 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC8.79□□□□□ -1
Cdx4Q07424 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Gm13809-201ENSMUST00000117921 597 ntBASIC8.79□□□□□ -1
Cdx4Q07424 Gm13045-201ENSMUST00000119019 712 ntBASIC8.79□□□□□ -1
Cdx4Q07424 Gm15207-201ENSMUST00000119259 442 ntBASIC8.79□□□□□ -1
Cdx4Q07424 Gm11700-201ENSMUST00000119409 403 ntBASIC8.79□□□□□ -1
Cdx4Q07424 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Gm6506-201ENSMUST00000119775 1136 ntBASIC8.79□□□□□ -1
Cdx4Q07424 Gm8566-201ENSMUST00000120174 465 ntBASIC8.79□□□□□ -1
Cdx4Q07424 Gm13461-201ENSMUST00000120980 662 ntBASIC8.79□□□□□ -1
Cdx4Q07424 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Cdx4Q07424 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC8.79□□□□□ -1
Cdx4Q07424 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
Cdx4Q07424 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC8.79□□□□□ -1
Cdx4Q07424 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC8.79□□□□□ -1
Cdx4Q07424 Gm10774-201ENSMUST00000188689 204 ntBASIC8.79□□□□□ -1
Cdx4Q07424 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 AC073947.1-201ENSMUST00000216991 649 ntBASIC8.79□□□□□ -1
Cdx4Q07424 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC8.79□□□□□ -1
Cdx4Q07424 Gm29787-201ENSMUST00000222129 849 ntBASIC8.79□□□□□ -1
Cdx4Q07424 Gm14267-206ENSMUST00000226870 1209 ntBASIC8.79□□□□□ -1
Cdx4Q07424 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
Cdx4Q07424 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC8.79□□□□□ -1
Cdx4Q07424 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Cdx4Q07424 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC8.79□□□□□ -1
Cdx4Q07424 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC8.79□□□□□ -1
Cdx4Q07424 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Cdx4Q07424 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC8.79□□□□□ -1
Cdx4Q07424 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC8.79□□□□□ -1
Cdx4Q07424 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Cdx4Q07424 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Cdx4Q07424 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Cdx4Q07424 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC8.78□□□□□ -1
Cdx4Q07424 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms