Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.61□□□□□ -0.55
Col9a1Q05722 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col9a1Q05722 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.6□□□□□ -0.55
Col9a1Q05722 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.6□□□□□ -0.55
Col9a1Q05722 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Col9a1Q05722 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Col9a1Q05722 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Gm3550-201ENSMUST00000105038 1656 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Col9a1Q05722 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Col9a1Q05722 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.6□□□□□ -0.55
Col9a1Q05722 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Col9a1Q05722 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Col9a1Q05722 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Gm11473-201ENSMUST00000118980 359 ntBASIC11.6□□□□□ -0.55
Col9a1Q05722 Gm15636-201ENSMUST00000119205 668 ntBASIC11.6□□□□□ -0.55
Col9a1Q05722 Gm14497-201ENSMUST00000119537 580 ntBASIC11.6□□□□□ -0.55
Col9a1Q05722 Gm6806-201ENSMUST00000120092 1006 ntBASIC11.6□□□□□ -0.55
Col9a1Q05722 Gm11660-201ENSMUST00000120955 412 ntBASIC11.6□□□□□ -0.55
Col9a1Q05722 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.6□□□□□ -0.55
Col9a1Q05722 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC11.6□□□□□ -0.55
Col9a1Q05722 Gm19791-201ENSMUST00000180398 859 ntBASIC11.6□□□□□ -0.55
Col9a1Q05722 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Gm37708-201ENSMUST00000192337 895 ntBASIC11.6□□□□□ -0.55
Col9a1Q05722 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC11.6□□□□□ -0.55
Col9a1Q05722 Gm37987-201ENSMUST00000194999 825 ntBASIC11.6□□□□□ -0.55
Col9a1Q05722 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC11.6□□□□□ -0.55
Col9a1Q05722 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 AC155259.1-201ENSMUST00000214794 477 ntBASIC11.6□□□□□ -0.55
Col9a1Q05722 AC164302.1-201ENSMUST00000227036 433 ntBASIC11.6□□□□□ -0.55
Col9a1Q05722 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Col9a1Q05722 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Col9a1Q05722 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Col9a1Q05722 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Col9a1Q05722 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Col9a1Q05722 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Col9a1Q05722 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col9a1Q05722 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.59□□□□□ -0.55
Col9a1Q05722 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Col9a1Q05722 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm11868-201ENSMUST00000121594 1478 ntBASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC11.59□□□□□ -0.55
Col9a1Q05722 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC11.59□□□□□ -0.55
Col9a1Q05722 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms