Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.69□□□□□ -0.86
Smn1P97801 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.69□□□□□ -0.86
Smn1P97801 Gm44008-201ENSMUST00000204345 412 ntBASIC9.69□□□□□ -0.86
Smn1P97801 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Smn1P97801 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.69□□□□□ -0.86
Smn1P97801 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC9.69□□□□□ -0.86
Smn1P97801 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.69□□□□□ -0.86
Smn1P97801 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Smn1P97801 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Smn1P97801 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.69□□□□□ -0.86
Smn1P97801 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Smn1P97801 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Smn1P97801 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Smn1P97801 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Smn1P97801 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Gm38116-201ENSMUST00000193873 1533 ntBASIC9.68□□□□□ -0.86
Smn1P97801 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.68□□□□□ -0.86
Smn1P97801 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Smn1P97801 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.68□□□□□ -0.86
Smn1P97801 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Smn1P97801 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC9.68□□□□□ -0.86
Smn1P97801 Gm14716-201ENSMUST00000120138 718 ntBASIC9.68□□□□□ -0.86
Smn1P97801 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC9.68□□□□□ -0.86
Smn1P97801 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC9.68□□□□□ -0.86
Smn1P97801 Gm20495-201ENSMUST00000173902 235 ntBASIC9.68□□□□□ -0.86
Smn1P97801 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Smn1P97801 Gm8885-201ENSMUST00000189382 598 ntBASIC9.68□□□□□ -0.86
Smn1P97801 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.68□□□□□ -0.86
Smn1P97801 Gm6334-201ENSMUST00000207083 228 ntBASIC9.68□□□□□ -0.86
Smn1P97801 Gm44651-201ENSMUST00000207343 372 ntBASIC9.68□□□□□ -0.86
Smn1P97801 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.68□□□□□ -0.86
Smn1P97801 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.68□□□□□ -0.86
Smn1P97801 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Smn1P97801 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.68□□□□□ -0.86
Smn1P97801 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.68□□□□□ -0.86
Smn1P97801 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.68□□□□□ -0.86
Smn1P97801 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Smn1P97801 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.68□□□□□ -0.86
Smn1P97801 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Smn1P97801 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.68□□□□□ -0.86
Smn1P97801 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smn1P97801 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smn1P97801 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smn1P97801 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.67□□□□□ -0.86
Smn1P97801 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Smn1P97801 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.67□□□□□ -0.86
Smn1P97801 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smn1P97801 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.67□□□□□ -0.86
Smn1P97801 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smn1P97801 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smn1P97801 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smn1P97801 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smn1P97801 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms