Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-3P97334 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-3P97334 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-3P97334 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-3P97334 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-3P97334 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Nkx2-3P97334 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-3P97334 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-3P97334 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-3P97334 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Nkx2-3P97334 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.21□□□□□ -0.14
Nkx2-3P97334 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-3P97334 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Gm43167-201ENSMUST00000202001 1606 ntBASIC14.2□□□□□ -0.14
Nkx2-3P97334 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Gm18733-202ENSMUST00000174447 401 ntBASIC14.2□□□□□ -0.14
Nkx2-3P97334 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Gm44605-201ENSMUST00000206892 949 ntBASIC14.2□□□□□ -0.14
Nkx2-3P97334 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC14.2□□□□□ -0.14
Nkx2-3P97334 AC158986.2-201ENSMUST00000227487 618 ntBASIC14.2□□□□□ -0.14
Nkx2-3P97334 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Gm19680-201ENSMUST00000095050 1513 ntBASIC14.2□□□□□ -0.14
Nkx2-3P97334 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkx2-3P97334 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-3P97334 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Gm14592-201ENSMUST00000117201 560 ntBASIC14.19□□□□□ -0.14
Nkx2-3P97334 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nkx2-3P97334 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Gm26368-201ENSMUST00000157826 118 ntBASIC14.19□□□□□ -0.14
Nkx2-3P97334 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC14.19□□□□□ -0.14
Nkx2-3P97334 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC14.19□□□□□ -0.14
Nkx2-3P97334 CT030166.5-201ENSMUST00000222249 420 ntBASIC14.19□□□□□ -0.14
Nkx2-3P97334 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.19□□□□□ -0.14
Nkx2-3P97334 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-3P97334 AC022682.1-201ENSMUST00000224624 2023 ntBASIC14.19□□□□□ -0.14
Nkx2-3P97334 AC122811.1-201ENSMUST00000222257 2921 ntBASIC14.18□□□□□ -0.14
Nkx2-3P97334 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nkx2-3P97334 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-3P97334 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-3P97334 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-3P97334 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms