Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
SgcaP82350 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
SgcaP82350 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
SgcaP82350 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.5□□□□□ -0.89
SgcaP82350 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
SgcaP82350 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
SgcaP82350 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC9.5□□□□□ -0.89
SgcaP82350 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC9.5□□□□□ -0.89
SgcaP82350 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.5□□□□□ -0.89
SgcaP82350 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC9.5□□□□□ -0.89
SgcaP82350 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Gm2546-201ENSMUST00000182630 991 ntBASIC9.5□□□□□ -0.89
SgcaP82350 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.5□□□□□ -0.89
SgcaP82350 Gm19287-201ENSMUST00000203190 358 ntBASIC9.5□□□□□ -0.89
SgcaP82350 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
SgcaP82350 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.5□□□□□ -0.89
SgcaP82350 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
SgcaP82350 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
SgcaP82350 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Gm9271-201ENSMUST00000185988 2580 ntBASIC9.5□□□□□ -0.89
SgcaP82350 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 AC160340.2-201ENSMUST00000220812 3675 ntBASIC9.5□□□□□ -0.89
SgcaP82350 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SgcaP82350 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
SgcaP82350 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SgcaP82350 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
SgcaP82350 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Gm8036-201ENSMUST00000118089 1718 ntBASIC9.49□□□□□ -0.89
SgcaP82350 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SgcaP82350 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC9.49□□□□□ -0.89
SgcaP82350 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
SgcaP82350 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Gm14832-201ENSMUST00000121289 322 ntBASIC9.49□□□□□ -0.89
SgcaP82350 Gm11424-201ENSMUST00000121929 829 ntBASIC9.49□□□□□ -0.89
SgcaP82350 Gm13316-201ENSMUST00000140537 691 ntBASIC9.49□□□□□ -0.89
SgcaP82350 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC9.49□□□□□ -0.89
SgcaP82350 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Gm25261-201ENSMUST00000157416 134 ntBASIC9.49□□□□□ -0.89
SgcaP82350 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
SgcaP82350 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.49□□□□□ -0.89
SgcaP82350 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9.49□□□□□ -0.89
SgcaP82350 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.49□□□□□ -0.89
SgcaP82350 Gm42627-201ENSMUST00000197347 224 ntBASIC9.49□□□□□ -0.89
SgcaP82350 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.49□□□□□ -0.89
SgcaP82350 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.49□□□□□ -0.89
SgcaP82350 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SgcaP82350 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
SgcaP82350 AC163667.3-201ENSMUST00000225774 222 ntBASIC9.49□□□□□ -0.89
SgcaP82350 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SgcaP82350 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.49□□□□□ -0.89
SgcaP82350 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Gm8131-201ENSMUST00000213783 1570 ntBASIC9.49□□□□□ -0.89
SgcaP82350 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms