Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
SgcbP82349 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
SgcbP82349 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
SgcbP82349 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
SgcbP82349 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
SgcbP82349 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
SgcbP82349 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
SgcbP82349 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
SgcbP82349 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
SgcbP82349 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
SgcbP82349 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.18□□□□□ -0.78
SgcbP82349 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.18□□□□□ -0.78
SgcbP82349 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 AC154186.1-201ENSMUST00000227711 1597 ntBASIC10.18□□□□□ -0.78
SgcbP82349 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
SgcbP82349 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.18□□□□□ -0.78
SgcbP82349 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Gm22711-201ENSMUST00000116890 133 ntBASIC10.18□□□□□ -0.78
SgcbP82349 Gm11949-201ENSMUST00000117640 372 ntBASIC10.18□□□□□ -0.78
SgcbP82349 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.18□□□□□ -0.78
SgcbP82349 Gm5133-201ENSMUST00000118940 1255 ntBASIC10.18□□□□□ -0.78
SgcbP82349 Gm11246-201ENSMUST00000120880 345 ntBASIC10.18□□□□□ -0.78
SgcbP82349 Gm11244-201ENSMUST00000121243 237 ntBASIC10.18□□□□□ -0.78
SgcbP82349 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Gm20495-201ENSMUST00000173902 235 ntBASIC10.18□□□□□ -0.78
SgcbP82349 Gm7467-201ENSMUST00000185173 652 ntBASIC10.18□□□□□ -0.78
SgcbP82349 Gm37017-201ENSMUST00000195266 747 ntBASIC10.18□□□□□ -0.78
SgcbP82349 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC10.18□□□□□ -0.78
SgcbP82349 Gm43002-201ENSMUST00000200310 155 ntBASIC10.18□□□□□ -0.78
SgcbP82349 Gm44008-201ENSMUST00000204345 412 ntBASIC10.18□□□□□ -0.78
SgcbP82349 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Gm44548-201ENSMUST00000208929 192 ntBASIC10.18□□□□□ -0.78
SgcbP82349 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.18□□□□□ -0.78
SgcbP82349 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
SgcbP82349 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
SgcbP82349 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.18□□□□□ -0.78
SgcbP82349 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
SgcbP82349 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.18□□□□□ -0.78
SgcbP82349 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SgcbP82349 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
SgcbP82349 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.17□□□□□ -0.78
SgcbP82349 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.17□□□□□ -0.78
SgcbP82349 Gm44286-201ENSMUST00000204098 1487 ntBASIC10.17□□□□□ -0.78
SgcbP82349 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
SgcbP82349 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.17□□□□□ -0.78
SgcbP82349 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.17□□□□□ -0.78
SgcbP82349 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.17□□□□□ -0.78
SgcbP82349 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.17□□□□□ -0.78
SgcbP82349 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
SgcbP82349 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC10.17□□□□□ -0.78
SgcbP82349 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.17□□□□□ -0.78
SgcbP82349 Gm15615-201ENSMUST00000118876 198 ntBASIC10.17□□□□□ -0.78
SgcbP82349 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms