Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.97□□□□□ -0.81
Lsm6P62313 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Gm23251-201ENSMUST00000103773 110 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Gm4294-201ENSMUST00000105169 614 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Gm15617-201ENSMUST00000118973 771 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.97□□□□□ -0.81
Lsm6P62313 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC9.97□□□□□ -0.81
Lsm6P62313 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC9.97□□□□□ -0.81
Lsm6P62313 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Lsm6P62313 Gm10774-201ENSMUST00000188689 204 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Gm37835-201ENSMUST00000193305 361 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Gm9353-201ENSMUST00000200472 604 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Gm7504-201ENSMUST00000201449 424 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Gm43852-201ENSMUST00000202098 917 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.97□□□□□ -0.81
Lsm6P62313 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.97□□□□□ -0.81
Lsm6P62313 Gm1821-202ENSMUST00000227415 750 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Lsm6P62313 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Lsm6P62313 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Lsm6P62313 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Lsm6P62313 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Gm5171-201ENSMUST00000214944 1415 ntBASIC9.97□□□□□ -0.81
Lsm6P62313 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
Lsm6P62313 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.97□□□□□ -0.81
Lsm6P62313 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Lsm6P62313 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.97□□□□□ -0.81
Lsm6P62313 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lsm6P62313 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Lsm6P62313 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Lsm6P62313 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.96□□□□□ -0.81
Lsm6P62313 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Lsm6P62313 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lsm6P62313 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Lsm6P62313 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lsm6P62313 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lsm6P62313 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.96□□□□□ -0.81
Lsm6P62313 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lsm6P62313 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Lsm6P62313 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.96□□□□□ -0.81
Lsm6P62313 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.96□□□□□ -0.81
Lsm6P62313 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Lsm6P62313 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lsm6P62313 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Lsm6P62313 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Lsm6P62313 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Lsm6P62313 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Gm15549-201ENSMUST00000121595 622 ntBASIC9.96□□□□□ -0.82
Lsm6P62313 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.96□□□□□ -0.82
Lsm6P62313 Gm7666-201ENSMUST00000146631 819 ntBASIC9.96□□□□□ -0.82
Lsm6P62313 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.96□□□□□ -0.82
Lsm6P62313 Gm37246-201ENSMUST00000192665 835 ntBASIC9.96□□□□□ -0.82
Lsm6P62313 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC9.96□□□□□ -0.82
Lsm6P62313 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.96□□□□□ -0.82
Lsm6P62313 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.96□□□□□ -0.82
Lsm6P62313 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.96□□□□□ -0.82
Lsm6P62313 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.96□□□□□ -0.82
Lsm6P62313 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.96□□□□□ -0.82
Lsm6P62313 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.96□□□□□ -0.82
Lsm6P62313 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.96□□□□□ -0.82
Lsm6P62313 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.82
Lsm6P62313 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Lsm6P62313 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Lsm6P62313 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lsm6P62313 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms