Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp4P59240 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp4P59240 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Gm42498-201ENSMUST00000199981 1372 ntBASIC15.22■□□□□ 0.03
Nphp4P59240 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC15.22■□□□□ 0.03
Nphp4P59240 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 AC122860.2-201ENSMUST00000217967 2671 ntBASIC15.22■□□□□ 0.03
Nphp4P59240 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nphp4P59240 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.22■□□□□ 0.03
Nphp4P59240 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Gm11957-201ENSMUST00000118304 779 ntBASIC15.22■□□□□ 0.03
Nphp4P59240 Gm12712-201ENSMUST00000120676 801 ntBASIC15.22■□□□□ 0.03
Nphp4P59240 Gm8876-201ENSMUST00000120768 1122 ntBASIC15.22■□□□□ 0.03
Nphp4P59240 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Gm16167-201ENSMUST00000160428 1065 ntBASIC15.22■□□□□ 0.03
Nphp4P59240 Gm25677-201ENSMUST00000174983 72 ntBASIC15.22■□□□□ 0.03
Nphp4P59240 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC15.22■□□□□ 0.03
Nphp4P59240 Gm40879-201ENSMUST00000220759 612 ntBASIC15.22■□□□□ 0.03
Nphp4P59240 AC126799.1-201ENSMUST00000221976 246 ntBASIC15.22■□□□□ 0.03
Nphp4P59240 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp4P59240 Gm19178-201ENSMUST00000217524 1819 ntBASIC15.21■□□□□ 0.03
Nphp4P59240 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Nphp4P59240 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC15.21■□□□□ 0.03
Nphp4P59240 Gm24074-201ENSMUST00000158178 260 ntBASIC15.21■□□□□ 0.03
Nphp4P59240 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Nphp4P59240 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC15.21■□□□□ 0.03
Nphp4P59240 Mipep-ps-201ENSMUST00000177439 291 ntBASIC15.21■□□□□ 0.03
Nphp4P59240 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC15.21■□□□□ 0.03
Nphp4P59240 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC15.21■□□□□ 0.03
Nphp4P59240 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC15.21■□□□□ 0.03
Nphp4P59240 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Nphp4P59240 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Nphp4P59240 n-R5s71-201ENSMUST00000093668 119 ntBASIC15.21■□□□□ 0.03
Nphp4P59240 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nphp4P59240 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Nphp4P59240 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nphp4P59240 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nphp4P59240 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nphp4P59240 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nphp4P59240 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nphp4P59240 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nphp4P59240 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nphp4P59240 Gfra2-203ENSMUST00000227697 1323 ntBASIC15.2■□□□□ 0.02
Nphp4P59240 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Nphp4P59240 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nphp4P59240 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC15.2■□□□□ 0.02
Nphp4P59240 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Nphp4P59240 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp4P59240 Gm7541-201ENSMUST00000118361 535 ntBASIC15.2■□□□□ 0.02
Nphp4P59240 Gm6758-201ENSMUST00000119643 1055 ntBASIC15.2■□□□□ 0.02
Nphp4P59240 Gm14113-201ENSMUST00000121399 976 ntBASIC15.2■□□□□ 0.02
Nphp4P59240 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC15.2■□□□□ 0.02
Nphp4P59240 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Nphp4P59240 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp4P59240 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC15.2■□□□□ 0.02
Nphp4P59240 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC15.2■□□□□ 0.02
Nphp4P59240 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp4P59240 Ighv5-8-202ENSMUST00000191967 337 ntBASIC15.2■□□□□ 0.02
Nphp4P59240 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC15.2■□□□□ 0.02
Nphp4P59240 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp4P59240 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp4P59240 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC15.2■□□□□ 0.02
Nphp4P59240 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp4P59240 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp4P59240 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp4P59240 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nphp4P59240 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Nphp4P59240 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp4P59240 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nphp4P59240 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms