Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Gm8464-202ENSMUST00000146697 1142 ntBASIC14.21□□□□□ -0.13
Vps33bP59016 Gm4750-201ENSMUST00000151942 1142 ntBASIC14.21□□□□□ -0.13
Vps33bP59016 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC14.21□□□□□ -0.13
Vps33bP59016 Gm18164-201ENSMUST00000213769 927 ntBASIC14.21□□□□□ -0.13
Vps33bP59016 Gm8162-201ENSMUST00000213951 665 ntBASIC14.21□□□□□ -0.13
Vps33bP59016 Gm18166-201ENSMUST00000215557 927 ntBASIC14.21□□□□□ -0.13
Vps33bP59016 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC14.21□□□□□ -0.13
Vps33bP59016 Gm7242-201ENSMUST00000221134 705 ntBASIC14.21□□□□□ -0.13
Vps33bP59016 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps33bP59016 Gm5424-201ENSMUST00000053865 1240 ntBASIC14.21□□□□□ -0.13
Vps33bP59016 Gm8730-201ENSMUST00000076373 954 ntBASIC14.21□□□□□ -0.13
Vps33bP59016 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Vps33bP59016 Btrc-209ENSMUST00000224478 2194 ntBASIC14.21□□□□□ -0.13
Vps33bP59016 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vps33bP59016 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Vps33bP59016 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vps33bP59016 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Vps33bP59016 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps33bP59016 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Vps33bP59016 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps33bP59016 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vps33bP59016 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vps33bP59016 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps33bP59016 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Gm8968-201ENSMUST00000199133 1303 ntBASIC14.2□□□□□ -0.14
Vps33bP59016 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vps33bP59016 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.2□□□□□ -0.14
Vps33bP59016 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vps33bP59016 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Vps33bP59016 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps33bP59016 Gm5764-201ENSMUST00000118817 885 ntBASIC14.2□□□□□ -0.14
Vps33bP59016 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC14.2□□□□□ -0.14
Vps33bP59016 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Vps33bP59016 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC14.2□□□□□ -0.14
Vps33bP59016 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC14.2□□□□□ -0.14
Vps33bP59016 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Mir341-201ENSMUST00000093593 96 ntBASIC14.2□□□□□ -0.14
Vps33bP59016 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps33bP59016 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps33bP59016 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vps33bP59016 Cog3-203ENSMUST00000227473 4197 ntBASIC14.19□□□□□ -0.14
Vps33bP59016 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Vps33bP59016 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vps33bP59016 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Gm11540-201ENSMUST00000117457 780 ntBASIC14.19□□□□□ -0.14
Vps33bP59016 Gm14639-201ENSMUST00000120850 866 ntBASIC14.19□□□□□ -0.14
Vps33bP59016 Gm6238-201ENSMUST00000120999 465 ntBASIC14.19□□□□□ -0.14
Vps33bP59016 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vps33bP59016 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC14.19□□□□□ -0.14
Vps33bP59016 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC14.19□□□□□ -0.14
Vps33bP59016 Gm44540-201ENSMUST00000205640 354 ntBASIC14.19□□□□□ -0.14
Vps33bP59016 Gm8170-201ENSMUST00000218581 945 ntBASIC14.19□□□□□ -0.14
Vps33bP59016 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps33bP59016 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms