Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Ctdsp1P58466 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC8.79□□□□□ -1
Ctdsp1P58466 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Ctdsp1P58466 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ctdsp1P58466 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Ctdsp1P58466 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Ctdsp1P58466 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC8.78□□□□□ -1
Ctdsp1P58466 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Ctdsp1P58466 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC8.78□□□□□ -1
Ctdsp1P58466 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC8.78□□□□□ -1
Ctdsp1P58466 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC8.78□□□□□ -1
Ctdsp1P58466 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC8.78□□□□□ -1
Ctdsp1P58466 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC8.78□□□□□ -1
Ctdsp1P58466 Gm12363-201ENSMUST00000122250 668 ntBASIC8.78□□□□□ -1
Ctdsp1P58466 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC8.78□□□□□ -1
Ctdsp1P58466 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Ctdsp1P58466 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Ctdsp1P58466 Gm37497-201ENSMUST00000195830 798 ntBASIC8.78□□□□□ -1
Ctdsp1P58466 Gm42937-201ENSMUST00000197360 752 ntBASIC8.78□□□□□ -1
Ctdsp1P58466 Gm2824-203ENSMUST00000226189 1228 ntBASIC8.78□□□□□ -1
Ctdsp1P58466 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Gm22058-201ENSMUST00000083393 310 ntBASIC8.78□□□□□ -1
Ctdsp1P58466 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC8.78□□□□□ -1
Ctdsp1P58466 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 AC154849.3-201ENSMUST00000223733 1660 ntBASIC8.78□□□□□ -1
Ctdsp1P58466 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Ctdsp1P58466 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Cdh18-207ENSMUST00000226693 2165 ntBASIC8.78□□□□□ -1
Ctdsp1P58466 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ctdsp1P58466 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC8.77□□□□□ -1
Ctdsp1P58466 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
Ctdsp1P58466 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC8.77□□□□□ -1
Ctdsp1P58466 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ctdsp1P58466 Adamts13-202ENSMUST00000102891 4506 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ctdsp1P58466 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC8.77□□□□□ -1
Ctdsp1P58466 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC8.77□□□□□ -1
Ctdsp1P58466 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 AC149588.2-201ENSMUST00000228182 1859 ntBASIC8.77□□□□□ -1.01
Ctdsp1P58466 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 AC117648.1-201ENSMUST00000219777 2510 ntBASIC8.77□□□□□ -1.01
Ctdsp1P58466 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 Gm18893-201ENSMUST00000198416 943 ntBASIC8.77□□□□□ -1.01
Ctdsp1P58466 Gm5904-201ENSMUST00000210286 865 ntBASIC8.77□□□□□ -1.01
Ctdsp1P58466 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ctdsp1P58466 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC8.77□□□□□ -1.01
Ctdsp1P58466 AC225888.1-201ENSMUST00000227184 728 ntBASIC8.77□□□□□ -1.01
Ctdsp1P58466 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms