Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gm22614-201ENSMUST00000178300 165 ntBASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gm44364-201ENSMUST00000198368 141 ntBASIC10.83□□□□□ -0.68
Cdkn2bP55271 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gm22042-201ENSMUST00000082989 165 ntBASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gm26110-201ENSMUST00000083971 165 ntBASIC10.83□□□□□ -0.68
Cdkn2bP55271 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdkn2bP55271 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cdkn2bP55271 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.82□□□□□ -0.68
Cdkn2bP55271 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.82□□□□□ -0.68
Cdkn2bP55271 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Snord17-201ENSMUST00000104526 238 ntBASIC10.82□□□□□ -0.68
Cdkn2bP55271 Gm25148-201ENSMUST00000104611 123 ntBASIC10.82□□□□□ -0.68
Cdkn2bP55271 Gm12196-201ENSMUST00000120954 262 ntBASIC10.82□□□□□ -0.68
Cdkn2bP55271 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Cdkn2bP55271 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.82□□□□□ -0.68
Cdkn2bP55271 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Gm7003-201ENSMUST00000195089 312 ntBASIC10.82□□□□□ -0.68
Cdkn2bP55271 Gm2965-201ENSMUST00000198365 343 ntBASIC10.82□□□□□ -0.68
Cdkn2bP55271 Gm44262-201ENSMUST00000204969 372 ntBASIC10.82□□□□□ -0.68
Cdkn2bP55271 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.82□□□□□ -0.68
Cdkn2bP55271 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.82□□□□□ -0.68
Cdkn2bP55271 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdkn2bP55271 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.82□□□□□ -0.68
Cdkn2bP55271 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Gm12247-201ENSMUST00000117585 670 ntBASIC10.81□□□□□ -0.68
Cdkn2bP55271 Gm12579-201ENSMUST00000118040 783 ntBASIC10.81□□□□□ -0.68
Cdkn2bP55271 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 132.7 ms