Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.33□□□□□ -0.6
Fdft1P53798 Gm24891-201ENSMUST00000104391 136 ntBASIC11.33□□□□□ -0.6
Fdft1P53798 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Fdft1P53798 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.33□□□□□ -0.6
Fdft1P53798 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Gm13461-201ENSMUST00000120980 662 ntBASIC11.33□□□□□ -0.6
Fdft1P53798 Gm8199-201ENSMUST00000121323 823 ntBASIC11.33□□□□□ -0.6
Fdft1P53798 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.33□□□□□ -0.6
Fdft1P53798 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.33□□□□□ -0.6
Fdft1P53798 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.33□□□□□ -0.6
Fdft1P53798 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.33□□□□□ -0.6
Fdft1P53798 Gm23085-201ENSMUST00000157849 293 ntBASIC11.33□□□□□ -0.6
Fdft1P53798 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.33□□□□□ -0.6
Fdft1P53798 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Fdft1P53798 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.33□□□□□ -0.6
Fdft1P53798 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Fdft1P53798 Gm5733-201ENSMUST00000190232 939 ntBASIC11.33□□□□□ -0.6
Fdft1P53798 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.33□□□□□ -0.6
Fdft1P53798 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.33□□□□□ -0.6
Fdft1P53798 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.33□□□□□ -0.6
Fdft1P53798 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.33□□□□□ -0.6
Fdft1P53798 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.33□□□□□ -0.6
Fdft1P53798 Gm4482-201ENSMUST00000200876 742 ntBASIC11.33□□□□□ -0.6
Fdft1P53798 Gm43966-201ENSMUST00000203301 612 ntBASIC11.33□□□□□ -0.6
Fdft1P53798 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.33□□□□□ -0.6
Fdft1P53798 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.33□□□□□ -0.6
Fdft1P53798 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.33□□□□□ -0.6
Fdft1P53798 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.33□□□□□ -0.6
Fdft1P53798 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.33□□□□□ -0.6
Fdft1P53798 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.33□□□□□ -0.6
Fdft1P53798 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.33□□□□□ -0.6
Fdft1P53798 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Fdft1P53798 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.32□□□□□ -0.6
Fdft1P53798 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Fdft1P53798 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.32□□□□□ -0.6
Fdft1P53798 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.32□□□□□ -0.6
Fdft1P53798 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Fdft1P53798 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Fdft1P53798 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Fdft1P53798 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Fdft1P53798 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Fdft1P53798 Gm13916-201ENSMUST00000117368 628 ntBASIC11.32□□□□□ -0.6
Fdft1P53798 Gm12997-201ENSMUST00000120207 640 ntBASIC11.32□□□□□ -0.6
Fdft1P53798 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Fdft1P53798 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.32□□□□□ -0.6
Fdft1P53798 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Gm3329-201ENSMUST00000159873 556 ntBASIC11.32□□□□□ -0.6
Fdft1P53798 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Gm18056-201ENSMUST00000207670 568 ntBASIC11.32□□□□□ -0.6
Fdft1P53798 Gm18061-201ENSMUST00000208350 562 ntBASIC11.32□□□□□ -0.6
Fdft1P53798 Gm18063-201ENSMUST00000208529 568 ntBASIC11.32□□□□□ -0.6
Fdft1P53798 Gm18052-201ENSMUST00000208750 559 ntBASIC11.32□□□□□ -0.6
Fdft1P53798 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.32□□□□□ -0.6
Fdft1P53798 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.32□□□□□ -0.6
Fdft1P53798 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.32□□□□□ -0.6
Fdft1P53798 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Fdft1P53798 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Fdft1P53798 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Fdft1P53798 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Fdft1P53798 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fdft1P53798 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.32□□□□□ -0.6
Fdft1P53798 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Fdft1P53798 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms