Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.64□□□□□ -0.55
Sox1P53783 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
Sox1P53783 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.64□□□□□ -0.55
Sox1P53783 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC11.64□□□□□ -0.55
Sox1P53783 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.64□□□□□ -0.55
Sox1P53783 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox1P53783 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Sox1P53783 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Sox1P53783 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.63□□□□□ -0.55
Sox1P53783 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.63□□□□□ -0.55
Sox1P53783 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.63□□□□□ -0.55
Sox1P53783 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Sox1P53783 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sox1P53783 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sox1P53783 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sox1P53783 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sox1P53783 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sox1P53783 Gm4034-201ENSMUST00000187674 480 ntBASIC11.63□□□□□ -0.55
Sox1P53783 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.63□□□□□ -0.55
Sox1P53783 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.63□□□□□ -0.55
Sox1P53783 Gm5738-201ENSMUST00000206016 779 ntBASIC11.63□□□□□ -0.55
Sox1P53783 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 AC116797.2-202ENSMUST00000223587 1017 ntBASIC11.63□□□□□ -0.55
Sox1P53783 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sox1P53783 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.63□□□□□ -0.55
Sox1P53783 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.63□□□□□ -0.55
Sox1P53783 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Sox1P53783 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sox1P53783 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.63□□□□□ -0.55
Sox1P53783 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Sox1P53783 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.63□□□□□ -0.55
Sox1P53783 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Sox1P53783 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.63□□□□□ -0.55
Sox1P53783 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox1P53783 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sox1P53783 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Gm12028-201ENSMUST00000118065 436 ntBASIC11.62□□□□□ -0.55
Sox1P53783 Gm9133-201ENSMUST00000118289 540 ntBASIC11.62□□□□□ -0.55
Sox1P53783 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC11.62□□□□□ -0.55
Sox1P53783 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox1P53783 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox1P53783 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC11.62□□□□□ -0.55
Sox1P53783 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC11.62□□□□□ -0.55
Sox1P53783 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sox1P53783 Gm37723-201ENSMUST00000194480 565 ntBASIC11.62□□□□□ -0.55
Sox1P53783 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sox1P53783 Gm43564-201ENSMUST00000196185 211 ntBASIC11.62□□□□□ -0.55
Sox1P53783 Gm8828-201ENSMUST00000196786 1290 ntBASIC11.62□□□□□ -0.55
Sox1P53783 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC11.62□□□□□ -0.55
Sox1P53783 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11.62□□□□□ -0.55
Sox1P53783 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sox1P53783 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sox1P53783 Gm8730-201ENSMUST00000076373 954 ntBASIC11.62□□□□□ -0.55
Sox1P53783 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sox1P53783 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Sox1P53783 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms