Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.2□□□□□ -0.62
Pdx1P52946 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Pdx1P52946 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Pdx1P52946 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.19□□□□□ -0.62
Pdx1P52946 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.19□□□□□ -0.62
Pdx1P52946 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.19□□□□□ -0.62
Pdx1P52946 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.19□□□□□ -0.62
Pdx1P52946 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Gm12218-201ENSMUST00000117666 399 ntBASIC11.19□□□□□ -0.62
Pdx1P52946 Gm14395-201ENSMUST00000120494 563 ntBASIC11.19□□□□□ -0.62
Pdx1P52946 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Mir1943-201ENSMUST00000158276 73 ntBASIC11.19□□□□□ -0.62
Pdx1P52946 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Gm29067-201ENSMUST00000190821 470 ntBASIC11.19□□□□□ -0.62
Pdx1P52946 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.19□□□□□ -0.62
Pdx1P52946 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.19□□□□□ -0.62
Pdx1P52946 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.19□□□□□ -0.62
Pdx1P52946 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.19□□□□□ -0.62
Pdx1P52946 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pdx1P52946 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.19□□□□□ -0.62
Pdx1P52946 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Pdx1P52946 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pdx1P52946 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Pdx1P52946 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Pdx1P52946 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Pdx1P52946 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.19□□□□□ -0.62
Pdx1P52946 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Pdx1P52946 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Pdx1P52946 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pdx1P52946 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Pdx1P52946 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pdx1P52946 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Pdx1P52946 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Pdx1P52946 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
Pdx1P52946 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 Gm12463-201ENSMUST00000118271 849 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 Gm16071-201ENSMUST00000119589 793 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Gm17391-201ENSMUST00000171036 126 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.18□□□□□ -0.62
Pdx1P52946 Gm17826-201ENSMUST00000189720 798 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.18□□□□□ -0.62
Pdx1P52946 Gm3786-201ENSMUST00000202659 378 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 Gm43947-201ENSMUST00000203019 959 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Gm45398-201ENSMUST00000210561 165 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.18□□□□□ -0.62
Pdx1P52946 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 Gm5468-202ENSMUST00000227851 682 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.18□□□□□ -0.62
Pdx1P52946 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Pdx1P52946 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Pdx1P52946 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.18□□□□□ -0.62
Pdx1P52946 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms