Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lhx3P50481 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Lhx3P50481 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lhx3P50481 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lhx3P50481 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.47□□□□□ -0.57
Lhx3P50481 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lhx3P50481 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lhx3P50481 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lhx3P50481 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Lhx3P50481 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lhx3P50481 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.47□□□□□ -0.57
Lhx3P50481 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.47□□□□□ -0.57
Lhx3P50481 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lhx3P50481 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lhx3P50481 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lhx3P50481 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lhx3P50481 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lhx3P50481 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lhx3P50481 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lhx3P50481 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lhx3P50481 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lhx3P50481 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lhx3P50481 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.46□□□□□ -0.57
Lhx3P50481 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lhx3P50481 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lhx3P50481 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.46□□□□□ -0.57
Lhx3P50481 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.46□□□□□ -0.57
Lhx3P50481 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lhx3P50481 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lhx3P50481 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lhx3P50481 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Lhx3P50481 Mir1901-201ENSMUST00000122616 78 ntBASIC11.46□□□□□ -0.57
Lhx3P50481 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.46□□□□□ -0.57
Lhx3P50481 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.46□□□□□ -0.57
Lhx3P50481 Gm15744-201ENSMUST00000161734 213 ntBASIC11.46□□□□□ -0.57
Lhx3P50481 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lhx3P50481 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Lhx3P50481 Gm6407-201ENSMUST00000176468 549 ntBASIC11.46□□□□□ -0.57
Lhx3P50481 Gm26134-201ENSMUST00000178484 110 ntBASIC11.46□□□□□ -0.57
Lhx3P50481 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Lhx3P50481 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Lhx3P50481 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.46□□□□□ -0.57
Lhx3P50481 Mir6407-201ENSMUST00000184510 101 ntBASIC11.46□□□□□ -0.57
Lhx3P50481 Gm34023-201ENSMUST00000195539 217 ntBASIC11.46□□□□□ -0.57
Lhx3P50481 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lhx3P50481 Gm42816-201ENSMUST00000198433 325 ntBASIC11.46□□□□□ -0.57
Lhx3P50481 Gm6439-201ENSMUST00000199849 862 ntBASIC11.46□□□□□ -0.57
Lhx3P50481 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.46□□□□□ -0.57
Lhx3P50481 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lhx3P50481 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.46□□□□□ -0.57
Lhx3P50481 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.46□□□□□ -0.57
Lhx3P50481 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.46□□□□□ -0.57
Lhx3P50481 Gm19009-201ENSMUST00000223072 823 ntBASIC11.46□□□□□ -0.57
Lhx3P50481 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.46□□□□□ -0.57
Lhx3P50481 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Lhx3P50481 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lhx3P50481 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Lhx3P50481 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lhx3P50481 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lhx3P50481 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lhx3P50481 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lhx3P50481 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lhx3P50481 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lhx3P50481 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lhx3P50481 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Lhx3P50481 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.46□□□□□ -0.58
Lhx3P50481 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.46□□□□□ -0.58
Lhx3P50481 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Lhx3P50481 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lhx3P50481 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lhx3P50481 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lhx3P50481 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lhx3P50481 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lhx3P50481 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lhx3P50481 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lhx3P50481 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Lhx3P50481 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lhx3P50481 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lhx3P50481 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lhx3P50481 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Lhx3P50481 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Lhx3P50481 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lhx3P50481 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Lhx3P50481 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.45□□□□□ -0.58
Lhx3P50481 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.45□□□□□ -0.58
Lhx3P50481 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.45□□□□□ -0.58
Lhx3P50481 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lhx3P50481 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.45□□□□□ -0.58
Lhx3P50481 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.45□□□□□ -0.58
Lhx3P50481 Mir6998-201ENSMUST00000183343 64 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms