Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.52□□□□□ -0.57
Vps4bP46467 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Vps4bP46467 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vps4bP46467 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Vps4bP46467 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.52□□□□□ -0.57
Vps4bP46467 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Vps4bP46467 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.51□□□□□ -0.57
Vps4bP46467 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.51□□□□□ -0.57
Vps4bP46467 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Vps4bP46467 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Gm13263-201ENSMUST00000121271 838 ntBASIC11.51□□□□□ -0.57
Vps4bP46467 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.51□□□□□ -0.57
Vps4bP46467 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Gm22846-201ENSMUST00000157706 270 ntBASIC11.51□□□□□ -0.57
Vps4bP46467 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.51□□□□□ -0.57
Vps4bP46467 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.51□□□□□ -0.57
Vps4bP46467 Gm25732-201ENSMUST00000175168 60 ntBASIC11.51□□□□□ -0.57
Vps4bP46467 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Vps4bP46467 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.51□□□□□ -0.57
Vps4bP46467 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.51□□□□□ -0.57
Vps4bP46467 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.51□□□□□ -0.57
Vps4bP46467 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Vps4bP46467 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Vps4bP46467 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Vps4bP46467 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.51□□□□□ -0.57
Vps4bP46467 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Vps4bP46467 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Vps4bP46467 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Vps4bP46467 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vps4bP46467 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.5□□□□□ -0.57
Vps4bP46467 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Vps4bP46467 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.5□□□□□ -0.57
Vps4bP46467 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.5□□□□□ -0.57
Vps4bP46467 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Vps4bP46467 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.5□□□□□ -0.57
Vps4bP46467 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Vps4bP46467 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.5□□□□□ -0.57
Vps4bP46467 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.5□□□□□ -0.57
Vps4bP46467 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.5□□□□□ -0.57
Vps4bP46467 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Gm13916-201ENSMUST00000117368 628 ntBASIC11.5□□□□□ -0.57
Vps4bP46467 Gm14665-201ENSMUST00000122294 557 ntBASIC11.5□□□□□ -0.57
Vps4bP46467 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.5□□□□□ -0.57
Vps4bP46467 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.5□□□□□ -0.57
Vps4bP46467 Gm18734-201ENSMUST00000172937 808 ntBASIC11.5□□□□□ -0.57
Vps4bP46467 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.5□□□□□ -0.57
Vps4bP46467 Gm7003-201ENSMUST00000195089 312 ntBASIC11.5□□□□□ -0.57
Vps4bP46467 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Gm45118-201ENSMUST00000208928 825 ntBASIC11.5□□□□□ -0.57
Vps4bP46467 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.5□□□□□ -0.57
Vps4bP46467 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.5□□□□□ -0.57
Vps4bP46467 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Vps4bP46467 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.5□□□□□ -0.57
Vps4bP46467 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
Vps4bP46467 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vps4bP46467 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms