Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf9P41274 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf9P41274 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf9P41274 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf9P41274 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf9P41274 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf9P41274 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Tnfsf9P41274 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf9P41274 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Tnfsf9P41274 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf9P41274 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf9P41274 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf9P41274 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf9P41274 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfsf9P41274 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.87□□□□□ -0.67
Tnfsf9P41274 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Gm8302-201ENSMUST00000119217 852 ntBASIC10.87□□□□□ -0.67
Tnfsf9P41274 Gm12274-201ENSMUST00000120062 385 ntBASIC10.87□□□□□ -0.67
Tnfsf9P41274 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.87□□□□□ -0.67
Tnfsf9P41274 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Gm6407-201ENSMUST00000176468 549 ntBASIC10.87□□□□□ -0.67
Tnfsf9P41274 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Gm42816-201ENSMUST00000198433 325 ntBASIC10.87□□□□□ -0.67
Tnfsf9P41274 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.87□□□□□ -0.67
Tnfsf9P41274 Gm44158-201ENSMUST00000203881 505 ntBASIC10.87□□□□□ -0.67
Tnfsf9P41274 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.87□□□□□ -0.67
Tnfsf9P41274 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.87□□□□□ -0.67
Tnfsf9P41274 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.87□□□□□ -0.67
Tnfsf9P41274 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.87□□□□□ -0.67
Tnfsf9P41274 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.87□□□□□ -0.67
Tnfsf9P41274 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Tnfsf9P41274 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfsf9P41274 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Tnfsf9P41274 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.86□□□□□ -0.67
Tnfsf9P41274 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Gm25063-201ENSMUST00000104666 94 ntBASIC10.86□□□□□ -0.67
Tnfsf9P41274 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Gm43058-201ENSMUST00000197645 625 ntBASIC10.86□□□□□ -0.67
Tnfsf9P41274 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Tnfsf9P41274 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms