Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC11.67□□□□□ -0.54
Cxcl12P40224 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.67□□□□□ -0.54
Cxcl12P40224 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cxcl12P40224 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm13426-201ENSMUST00000117887 795 ntBASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm22388-201ENSMUST00000158194 248 ntBASIC11.67□□□□□ -0.54
Cxcl12P40224 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Mir8091-201ENSMUST00000183602 139 ntBASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.67□□□□□ -0.54
Cxcl12P40224 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC11.67□□□□□ -0.54
Cxcl12P40224 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
Cxcl12P40224 AC116797.2-202ENSMUST00000223587 1017 ntBASIC11.67□□□□□ -0.54
Cxcl12P40224 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11.67□□□□□ -0.54
Cxcl12P40224 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.67□□□□□ -0.54
Cxcl12P40224 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm10581-201ENSMUST00000097986 231 ntBASIC11.67□□□□□ -0.54
Cxcl12P40224 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.67□□□□□ -0.54
Cxcl12P40224 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.67□□□□□ -0.54
Cxcl12P40224 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.67□□□□□ -0.54
Cxcl12P40224 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cxcl12P40224 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.67□□□□□ -0.54
Cxcl12P40224 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Cxcl12P40224 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.66□□□□□ -0.54
Cxcl12P40224 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC11.66□□□□□ -0.54
Cxcl12P40224 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.66□□□□□ -0.54
Cxcl12P40224 Gm5526-201ENSMUST00000153604 423 ntBASIC11.66□□□□□ -0.54
Cxcl12P40224 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.66□□□□□ -0.54
Cxcl12P40224 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Gm9644-201ENSMUST00000212828 1183 ntBASIC11.66□□□□□ -0.54
Cxcl12P40224 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC11.66□□□□□ -0.54
Cxcl12P40224 AC154433.1-201ENSMUST00000224401 1183 ntBASIC11.66□□□□□ -0.54
Cxcl12P40224 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.66□□□□□ -0.54
Cxcl12P40224 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.66□□□□□ -0.54
Cxcl12P40224 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cxcl12P40224 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cxcl12P40224 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl12P40224 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.65□□□□□ -0.54
Cxcl12P40224 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms