Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.38□□□□□ -0.75
Nedd8P29595 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.38□□□□□ -0.75
Nedd8P29595 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nedd8P29595 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.38□□□□□ -0.75
Nedd8P29595 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.38□□□□□ -0.75
Nedd8P29595 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.38□□□□□ -0.75
Nedd8P29595 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.38□□□□□ -0.75
Nedd8P29595 Gm10268-201ENSMUST00000085340 555 ntBASIC10.38□□□□□ -0.75
Nedd8P29595 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nedd8P29595 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC10.38□□□□□ -0.75
Nedd8P29595 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC10.38□□□□□ -0.75
Nedd8P29595 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nedd8P29595 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nedd8P29595 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Nedd8P29595 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Nedd8P29595 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nedd8P29595 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nedd8P29595 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nedd8P29595 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nedd8P29595 Gm43274-201ENSMUST00000202545 5000 ntBASIC10.38□□□□□ -0.75
Nedd8P29595 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nedd8P29595 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nedd8P29595 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nedd8P29595 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nedd8P29595 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nedd8P29595 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.38□□□□□ -0.75
Nedd8P29595 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.38□□□□□ -0.75
Nedd8P29595 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nedd8P29595 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nedd8P29595 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nedd8P29595 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nedd8P29595 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nedd8P29595 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nedd8P29595 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Nedd8P29595 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.37□□□□□ -0.75
Nedd8P29595 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.37□□□□□ -0.75
Nedd8P29595 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nedd8P29595 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nedd8P29595 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Gm11500-201ENSMUST00000118237 601 ntBASIC10.37□□□□□ -0.75
Nedd8P29595 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.37□□□□□ -0.75
Nedd8P29595 Gm13875-201ENSMUST00000120162 282 ntBASIC10.37□□□□□ -0.75
Nedd8P29595 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.37□□□□□ -0.75
Nedd8P29595 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.37□□□□□ -0.75
Nedd8P29595 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.37□□□□□ -0.75
Nedd8P29595 Gm26927-201ENSMUST00000182385 965 ntBASIC10.37□□□□□ -0.75
Nedd8P29595 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 AC160340.2-201ENSMUST00000220812 3675 ntBASIC10.37□□□□□ -0.75
Nedd8P29595 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.37□□□□□ -0.75
Nedd8P29595 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nedd8P29595 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.37□□□□□ -0.75
Nedd8P29595 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nedd8P29595 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Nedd8P29595 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nedd8P29595 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nedd8P29595 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nedd8P29595 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Nedd8P29595 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.36□□□□□ -0.75
Nedd8P29595 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms