Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vcam1P29533 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vcam1P29533 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vcam1P29533 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vcam1P29533 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.98□□□□□ -0.33
Vcam1P29533 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcam1P29533 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.98□□□□□ -0.33
Vcam1P29533 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcam1P29533 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.98□□□□□ -0.33
Vcam1P29533 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vcam1P29533 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vcam1P29533 Gm11380-201ENSMUST00000118067 560 ntBASIC12.98□□□□□ -0.33
Vcam1P29533 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.98□□□□□ -0.33
Vcam1P29533 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vcam1P29533 Gm8451-201ENSMUST00000170338 447 ntBASIC12.98□□□□□ -0.33
Vcam1P29533 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vcam1P29533 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vcam1P29533 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vcam1P29533 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.98□□□□□ -0.33
Vcam1P29533 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vcam1P29533 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vcam1P29533 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.98□□□□□ -0.33
Vcam1P29533 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.98□□□□□ -0.33
Vcam1P29533 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcam1P29533 Gm7536-201ENSMUST00000077389 444 ntBASIC12.98□□□□□ -0.33
Vcam1P29533 Gm5453-201ENSMUST00000080866 447 ntBASIC12.98□□□□□ -0.33
Vcam1P29533 Gm8420-201ENSMUST00000097103 598 ntBASIC12.98□□□□□ -0.33
Vcam1P29533 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vcam1P29533 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcam1P29533 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcam1P29533 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcam1P29533 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcam1P29533 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.98□□□□□ -0.33
Vcam1P29533 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcam1P29533 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.98□□□□□ -0.33
Vcam1P29533 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.98□□□□□ -0.33
Vcam1P29533 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vcam1P29533 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcam1P29533 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcam1P29533 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.98□□□□□ -0.33
Vcam1P29533 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vcam1P29533 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.97□□□□□ -0.33
Vcam1P29533 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.97□□□□□ -0.33
Vcam1P29533 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Gm15036-201ENSMUST00000118880 400 ntBASIC12.97□□□□□ -0.33
Vcam1P29533 Gm13981-201ENSMUST00000122360 447 ntBASIC12.97□□□□□ -0.33
Vcam1P29533 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.97□□□□□ -0.33
Vcam1P29533 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Vcam1P29533 Gm9162-201ENSMUST00000182081 991 ntBASIC12.97□□□□□ -0.33
Vcam1P29533 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Vcam1P29533 Mir8091-201ENSMUST00000183602 139 ntBASIC12.97□□□□□ -0.33
Vcam1P29533 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.97□□□□□ -0.33
Vcam1P29533 Gm43506-201ENSMUST00000200675 753 ntBASIC12.97□□□□□ -0.33
Vcam1P29533 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.97□□□□□ -0.33
Vcam1P29533 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.97□□□□□ -0.33
Vcam1P29533 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.97□□□□□ -0.33
Vcam1P29533 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.97□□□□□ -0.33
Vcam1P29533 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.97□□□□□ -0.33
Vcam1P29533 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Vcam1P29533 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Vcam1P29533 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vcam1P29533 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Vcam1P29533 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.96□□□□□ -0.33
Vcam1P29533 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.96□□□□□ -0.33
Vcam1P29533 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.96□□□□□ -0.33
Vcam1P29533 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Gm14274-201ENSMUST00000117182 615 ntBASIC12.96□□□□□ -0.33
Vcam1P29533 Gm14592-201ENSMUST00000117201 560 ntBASIC12.96□□□□□ -0.33
Vcam1P29533 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.96□□□□□ -0.33
Vcam1P29533 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vcam1P29533 Gm13019-201ENSMUST00000120000 276 ntBASIC12.96□□□□□ -0.33
Vcam1P29533 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms