Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC13.16□□□□□ -0.3
Col1a1P11087 Gm5254-201ENSMUST00000188353 977 ntBASIC13.16□□□□□ -0.3
Col1a1P11087 Gm37851-201ENSMUST00000193871 889 ntBASIC13.16□□□□□ -0.3
Col1a1P11087 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC13.16□□□□□ -0.3
Col1a1P11087 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 AC129217.1-201ENSMUST00000225181 642 ntBASIC13.16□□□□□ -0.3
Col1a1P11087 AC121357.1-201ENSMUST00000227365 608 ntBASIC13.16□□□□□ -0.3
Col1a1P11087 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col1a1P11087 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Col1a1P11087 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 CT010480.4-201ENSMUST00000224654 2283 ntBASIC13.16□□□□□ -0.3
Col1a1P11087 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.16□□□□□ -0.3
Col1a1P11087 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Col1a1P11087 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col1a1P11087 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col1a1P11087 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Col1a1P11087 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col1a1P11087 Gm15746-201ENSMUST00000120684 1027 ntBASIC13.16□□□□□ -0.3
Col1a1P11087 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Col1a1P11087 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Gm8643-201ENSMUST00000195228 625 ntBASIC13.16□□□□□ -0.3
Col1a1P11087 Gm45310-201ENSMUST00000210436 275 ntBASIC13.16□□□□□ -0.3
Col1a1P11087 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC13.16□□□□□ -0.3
Col1a1P11087 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.16□□□□□ -0.3
Col1a1P11087 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col1a1P11087 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Col1a1P11087 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.15□□□□□ -0.3
Col1a1P11087 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col1a1P11087 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col1a1P11087 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col1a1P11087 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Col1a1P11087 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC13.15□□□□□ -0.3
Col1a1P11087 Gm5159-201ENSMUST00000212733 1652 ntBASIC13.15□□□□□ -0.3
Col1a1P11087 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col1a1P11087 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col1a1P11087 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.15□□□□□ -0.3
Col1a1P11087 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col1a1P11087 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col1a1P11087 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Col1a1P11087 Gm42815-201ENSMUST00000198787 1470 ntBASIC13.15□□□□□ -0.3
Col1a1P11087 Gm17836-201ENSMUST00000191976 1302 ntBASIC13.15□□□□□ -0.3
Col1a1P11087 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.15□□□□□ -0.3
Col1a1P11087 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col1a1P11087 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col1a1P11087 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col1a1P11087 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col1a1P11087 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col1a1P11087 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.15□□□□□ -0.3
Col1a1P11087 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC13.15□□□□□ -0.3
Col1a1P11087 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC13.15□□□□□ -0.3
Col1a1P11087 Gm16288-201ENSMUST00000137940 367 ntBASIC13.15□□□□□ -0.3
Col1a1P11087 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col1a1P11087 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC13.15□□□□□ -0.3
Col1a1P11087 Gm8226-201ENSMUST00000190511 798 ntBASIC13.15□□□□□ -0.3
Col1a1P11087 Platr10-202ENSMUST00000191479 818 ntBASIC13.15□□□□□ -0.3
Col1a1P11087 Gm33080-201ENSMUST00000205429 172 ntBASIC13.15□□□□□ -0.3
Col1a1P11087 AC116797.2-202ENSMUST00000223587 1017 ntBASIC13.15□□□□□ -0.3
Col1a1P11087 CT030195.2-201ENSMUST00000226074 1286 ntBASIC13.15□□□□□ -0.3
Col1a1P11087 AC154477.1-201ENSMUST00000226515 773 ntBASIC13.15□□□□□ -0.3
Col1a1P11087 AC137842.2-201ENSMUST00000227734 797 ntBASIC13.15□□□□□ -0.3
Col1a1P11087 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col1a1P11087 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col1a1P11087 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col1a1P11087 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Col1a1P11087 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col1a1P11087 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col1a1P11087 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC13.15□□□□□ -0.3
Col1a1P11087 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col1a1P11087 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.31
Col1a1P11087 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col1a1P11087 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col1a1P11087 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col1a1P11087 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col1a1P11087 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Col1a1P11087 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Col1a1P11087 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col1a1P11087 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col1a1P11087 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col1a1P11087 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms