Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Gm7666-201ENSMUST00000146631 819 ntBASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Gm12407-201ENSMUST00000180219 324 ntBASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Gm9211-201ENSMUST00000182882 975 ntBASIC12.36□□□□□ -0.43
Chmp6P0C0A3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Gm45118-201ENSMUST00000208928 825 ntBASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.36□□□□□ -0.43
Chmp6P0C0A3 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.36□□□□□ -0.43
Chmp6P0C0A3 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Gm22920-201ENSMUST00000102175 109 ntBASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Gm7150-201ENSMUST00000122032 981 ntBASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Gm22902-201ENSMUST00000158488 302 ntBASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Gm8459-201ENSMUST00000162504 760 ntBASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Gm9540-201ENSMUST00000188230 478 ntBASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Gm4978-201ENSMUST00000071565 801 ntBASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Chmp6P0C0A3 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Gm14071-201ENSMUST00000117817 509 ntBASIC12.34□□□□□ -0.43
Chmp6P0C0A3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Gm24844-201ENSMUST00000158679 127 ntBASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Mir6546-201ENSMUST00000184460 62 ntBASIC12.34□□□□□ -0.43
Chmp6P0C0A3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Gm3786-201ENSMUST00000202659 378 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms