Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NclP09405 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NclP09405 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC16.84■□□□□ 0.29
NclP09405 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 AC122840.1-201ENSMUST00000220915 3334 ntBASIC16.84■□□□□ 0.29
NclP09405 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Gm25880-201ENSMUST00000104331 132 ntBASIC16.84■□□□□ 0.29
NclP09405 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
NclP09405 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NclP09405 Gm12218-201ENSMUST00000117666 399 ntBASIC16.84■□□□□ 0.29
NclP09405 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC16.84■□□□□ 0.29
NclP09405 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NclP09405 AC174797.2-202ENSMUST00000225729 568 ntBASIC16.84■□□□□ 0.29
NclP09405 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Gm9915-201ENSMUST00000066196 1383 ntBASIC16.84■□□□□ 0.29
NclP09405 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Gm7278-201ENSMUST00000119836 1401 ntBASIC16.84■□□□□ 0.29
NclP09405 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NclP09405 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC16.84■□□□□ 0.29
NclP09405 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NclP09405 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NclP09405 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NclP09405 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
NclP09405 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NclP09405 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
NclP09405 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NclP09405 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
NclP09405 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
NclP09405 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
NclP09405 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NclP09405 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC16.83■□□□□ 0.28
NclP09405 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NclP09405 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC16.83■□□□□ 0.28
NclP09405 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC16.83■□□□□ 0.28
NclP09405 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NclP09405 Gm22877-201ENSMUST00000175451 105 ntBASIC16.83■□□□□ 0.28
NclP09405 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC16.83■□□□□ 0.28
NclP09405 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NclP09405 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
NclP09405 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC16.83■□□□□ 0.28
NclP09405 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC16.83■□□□□ 0.28
NclP09405 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NclP09405 AC126257.2-201ENSMUST00000215507 2300 ntBASIC16.83■□□□□ 0.28
NclP09405 AC167022.1-201ENSMUST00000218647 1458 ntBASIC16.83■□□□□ 0.28
NclP09405 AC154184.3-201ENSMUST00000225620 1090 ntBASIC16.83■□□□□ 0.28
NclP09405 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
NclP09405 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NclP09405 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NclP09405 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NclP09405 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NclP09405 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NclP09405 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NclP09405 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
NclP09405 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NclP09405 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NclP09405 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NclP09405 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
NclP09405 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC16.82■□□□□ 0.28
NclP09405 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NclP09405 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC16.82■□□□□ 0.28
NclP09405 Gm11340-201ENSMUST00000119226 412 ntBASIC16.82■□□□□ 0.28
NclP09405 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC16.82■□□□□ 0.28
NclP09405 Gm22379-201ENSMUST00000157480 131 ntBASIC16.82■□□□□ 0.28
NclP09405 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC16.82■□□□□ 0.28
NclP09405 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NclP09405 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC16.82■□□□□ 0.28
NclP09405 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC16.82■□□□□ 0.28
NclP09405 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Gm44323-201ENSMUST00000198689 129 ntBASIC16.82■□□□□ 0.28
NclP09405 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NclP09405 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms