Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.18□□□□□ -0.94
P04940 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC9.18□□□□□ -0.94
P04940 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.18□□□□□ -0.94
P04940 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
P04940 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.18□□□□□ -0.94
P04940 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
P04940 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
P04940 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
P04940 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
P04940 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
P04940 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.17□□□□□ -0.94
P04940 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
P04940 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
P04940 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
P04940 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.17□□□□□ -0.94
P04940 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.17□□□□□ -0.94
P04940 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Gm37651-201ENSMUST00000194679 1494 ntBASIC9.17□□□□□ -0.94
P04940 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
P04940 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
P04940 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC9.17□□□□□ -0.94
P04940 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
P04940 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC9.17□□□□□ -0.94
P04940 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.17□□□□□ -0.94
P04940 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC9.17□□□□□ -0.94
P04940 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
P04940 Gm23105-201ENSMUST00000083719 134 ntBASIC9.17□□□□□ -0.94
P04940 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
P04940 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
P04940 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
P04940 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.17□□□□□ -0.94
P04940 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.17□□□□□ -0.94
P04940 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
P04940 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
P04940 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
P04940 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
P04940 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
P04940 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
P04940 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
P04940 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms