Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm11993-201ENSMUST00000121861 820 ntBASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Gm6644-201ENSMUST00000186507 951 ntBASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Gm9644-201ENSMUST00000212828 1183 ntBASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 CT025689.1-201ENSMUST00000225214 283 ntBASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Gm9791-201ENSMUST00000060997 447 ntBASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 AC109214.1-201ENSMUST00000219520 1372 ntBASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Gm24279-201ENSMUST00000104236 131 ntBASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Gm7445-201ENSMUST00000192115 340 ntBASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Gm18555-201ENSMUST00000197935 584 ntBASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 CT025679.1-201ENSMUST00000227106 449 ntBASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc180J3QNE4 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 CT009713.2-201ENSMUST00000225532 1149 ntBASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc180J3QNE4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc180J3QNE4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc180J3QNE4 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC20.39■□□□□ 0.86
Ccdc180J3QNE4 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc180J3QNE4 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC20.39■□□□□ 0.86
Ccdc180J3QNE4 Gm5526-201ENSMUST00000153604 423 ntBASIC20.39■□□□□ 0.86
Ccdc180J3QNE4 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC20.39■□□□□ 0.86
Ccdc180J3QNE4 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Ccdc180J3QNE4 Gm28032-201ENSMUST00000184104 96 ntBASIC20.39■□□□□ 0.86
Ccdc180J3QNE4 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Ccdc180J3QNE4 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc180J3QNE4 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Ccdc180J3QNE4 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc180J3QNE4 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Gm18042-201ENSMUST00000219887 790 ntBASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Gm45677-201ENSMUST00000209975 1341 ntBASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms