Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gm16071-201ENSMUST00000119589 793 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Mir3102-201ENSMUST00000175555 104 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gm17826-201ENSMUST00000189720 798 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gm3551-201ENSMUST00000190750 664 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gm37299-201ENSMUST00000193951 826 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gm37826-201ENSMUST00000195329 322 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gm9645-201ENSMUST00000197131 792 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gm43058-201ENSMUST00000197645 625 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gm42997-202ENSMUST00000200321 985 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gm44980-201ENSMUST00000205826 314 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 CT030637.1-201ENSMUST00000228016 669 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gm10702-201ENSMUST00000098929 1268 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cpsf4lE9Q2N0 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Gm14942-201ENSMUST00000119642 336 ntBASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Gm6485-201ENSMUST00000160676 439 ntBASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Gm17391-201ENSMUST00000171036 126 ntBASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Gm18974-201ENSMUST00000221478 1031 ntBASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms