Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm8302-201ENSMUST00000119217 852 ntBASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm15374-201ENSMUST00000119313 844 ntBASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm22379-201ENSMUST00000157480 131 ntBASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm8197-202ENSMUST00000193422 934 ntBASIC11.23□□□□□ -0.61
Srp54bE9PXC0 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.23□□□□□ -0.61
Srp54bE9PXC0 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm45856-201ENSMUST00000212752 416 ntBASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Srp54bE9PXC0 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Gm25554-201ENSMUST00000158075 113 ntBASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Gm21778-201ENSMUST00000178779 471 ntBASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Gm18059-201ENSMUST00000208073 580 ntBASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Gm39288-201ENSMUST00000210554 446 ntBASIC11.22□□□□□ -0.61
Srp54bE9PXC0 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Mt1-202ENSMUST00000211807 1085 ntBASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Srp54bE9PXC0 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Srp54bE9PXC0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms