Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col4a6B1AVK5 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Gm12009-201ENSMUST00000121361 1100 ntBASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Gm26875-201ENSMUST00000181006 950 ntBASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Gm38349-201ENSMUST00000195732 462 ntBASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Gm9409-201ENSMUST00000197017 316 ntBASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Gm5738-201ENSMUST00000206016 779 ntBASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.46□□□□□ -0.58
Col4a6B1AVK5 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col4a6B1AVK5 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Gm15258-201ENSMUST00000153801 741 ntBASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Gm43097-201ENSMUST00000196867 151 ntBASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Gm42859-201ENSMUST00000199572 193 ntBASIC11.45□□□□□ -0.58
Col4a6B1AVK5 AC134913.2-201ENSMUST00000225017 771 ntBASIC11.45□□□□□ -0.58
Col4a6B1AVK5 AC103672.1-201ENSMUST00000227502 365 ntBASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col4a6B1AVK5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Gm14176-201ENSMUST00000121302 477 ntBASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC11.44□□□□□ -0.58
Col4a6B1AVK5 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms