Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Chd3B1AR17 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.11□□□□□ -0.63
Chd3B1AR17 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Chd3B1AR17 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Chd3B1AR17 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.11□□□□□ -0.63
Chd3B1AR17 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.11□□□□□ -0.63
Chd3B1AR17 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.11□□□□□ -0.63
Chd3B1AR17 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.11□□□□□ -0.63
Chd3B1AR17 Gm22379-201ENSMUST00000157480 131 ntBASIC11.11□□□□□ -0.63
Chd3B1AR17 Gm28324-201ENSMUST00000187913 264 ntBASIC11.11□□□□□ -0.63
Chd3B1AR17 Gm43966-201ENSMUST00000203301 612 ntBASIC11.11□□□□□ -0.63
Chd3B1AR17 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.11□□□□□ -0.63
Chd3B1AR17 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Chd3B1AR17 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Chd3B1AR17 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.11□□□□□ -0.63
Chd3B1AR17 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Chd3B1AR17 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chd3B1AR17 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Gm19246-201ENSMUST00000173599 255 ntBASIC11.1□□□□□ -0.63
Chd3B1AR17 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.1□□□□□ -0.63
Chd3B1AR17 Gm42433-201ENSMUST00000196806 940 ntBASIC11.1□□□□□ -0.63
Chd3B1AR17 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Gm25053-201ENSMUST00000103982 133 ntBASIC11.1□□□□□ -0.63
Chd3B1AR17 Gm25922-201ENSMUST00000104281 130 ntBASIC11.1□□□□□ -0.63
Chd3B1AR17 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Gm24248-201ENSMUST00000157321 322 ntBASIC11.1□□□□□ -0.63
Chd3B1AR17 Gm24679-201ENSMUST00000158762 111 ntBASIC11.1□□□□□ -0.63
Chd3B1AR17 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Mir3060-201ENSMUST00000175339 83 ntBASIC11.1□□□□□ -0.63
Chd3B1AR17 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.1□□□□□ -0.63
Chd3B1AR17 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.1□□□□□ -0.63
Chd3B1AR17 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.1□□□□□ -0.63
Chd3B1AR17 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Gm25053-202ENSMUST00000199731 132 ntBASIC11.1□□□□□ -0.63
Chd3B1AR17 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.1□□□□□ -0.63
Chd3B1AR17 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Gm8420-201ENSMUST00000097103 598 ntBASIC11.1□□□□□ -0.63
Chd3B1AR17 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd3B1AR17 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Chd3B1AR17 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms