Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hmgn5Q9JL35 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn5Q9JL35 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn5Q9JL35 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn5Q9JL35 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hmgn5Q9JL35 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn5Q9JL35 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmgn5Q9JL35 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Gm27731-201ENSMUST00000185192 107 ntBASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Gm38117-201ENSMUST00000194653 939 ntBASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Gm7940-201ENSMUST00000218195 769 ntBASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn5Q9JL35 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Gm38158-201ENSMUST00000194617 339 ntBASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Gm43962-201ENSMUST00000203898 190 ntBASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Morn2-202ENSMUST00000227729 656 ntBASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn5Q9JL35 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgn5Q9JL35 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgn5Q9JL35 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Hmgn5Q9JL35 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.71□□□□□ -0.38
Hmgn5Q9JL35 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgn5Q9JL35 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgn5Q9JL35 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.71□□□□□ -0.38
Hmgn5Q9JL35 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgn5Q9JL35 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgn5Q9JL35 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgn5Q9JL35 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn5Q9JL35 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms