Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk3aQ9JKX8 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Gm10179-201ENSMUST00000086233 688 ntBASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Upk3aQ9JKX8 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Upk3aQ9JKX8 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Upk3aQ9JKX8 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Upk3aQ9JKX8 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Upk3aQ9JKX8 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC10.9□□□□□ -0.67
Upk3aQ9JKX8 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.9□□□□□ -0.67
Upk3aQ9JKX8 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Gm5523-201ENSMUST00000180415 997 ntBASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Gm8197-202ENSMUST00000193422 934 ntBASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Gm43163-201ENSMUST00000196571 442 ntBASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Gm44323-201ENSMUST00000198689 129 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms