Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 CT009601.1-201ENSMUST00000225567 2705 ntBASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Rac2-201ENSMUST00000043214 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gpr68-202ENSMUST00000110065 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gm11597-201ENSMUST00000121423 964 ntBASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gm11960-201ENSMUST00000122068 925 ntBASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gm22175-201ENSMUST00000175007 78 ntBASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gm5370-201ENSMUST00000187187 574 ntBASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gm43966-201ENSMUST00000203301 612 ntBASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gm17931-201ENSMUST00000208132 634 ntBASIC9.01□□□□□ -0.97
Smco4Q9JIS3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 AC134254.1-201ENSMUST00000221362 167 ntBASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 R3hdm2-205ENSMUST00000105251 3739 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Adamts13-202ENSMUST00000102891 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gad1-201ENSMUST00000094934 3355 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.01□□□□□ -0.97
Smco4Q9JIS3 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Cdh18-207ENSMUST00000226693 2165 ntBASIC9□□□□□ -0.97
Smco4Q9JIS3 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC9□□□□□ -0.97
Smco4Q9JIS3 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9□□□□□ -0.97
Smco4Q9JIS3 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Smco4Q9JIS3 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Smco4Q9JIS3 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Smco4Q9JIS3 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Fam217a-202ENSMUST00000223834 2253 ntAPPRIS ALT2 BASIC9□□□□□ -0.97
Smco4Q9JIS3 Gm2606-201ENSMUST00000100754 1002 ntBASIC9□□□□□ -0.97
Smco4Q9JIS3 Gm23061-201ENSMUST00000102348 116 ntBASIC9□□□□□ -0.97
Smco4Q9JIS3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC9□□□□□ -0.97
Smco4Q9JIS3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Smco4Q9JIS3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9□□□□□ -0.97
Smco4Q9JIS3 Gm12286-201ENSMUST00000119246 1002 ntBASIC9□□□□□ -0.97
Smco4Q9JIS3 Gm15610-201ENSMUST00000120584 195 ntBASIC9□□□□□ -0.97
Smco4Q9JIS3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC9□□□□□ -0.97
Smco4Q9JIS3 Gm25226-201ENSMUST00000158198 123 ntBASIC9□□□□□ -0.97
Smco4Q9JIS3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC9□□□□□ -0.97
Smco4Q9JIS3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC9□□□□□ -0.97
Smco4Q9JIS3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC9□□□□□ -0.97
Smco4Q9JIS3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC9□□□□□ -0.97
Smco4Q9JIS3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC9□□□□□ -0.97
Smco4Q9JIS3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC9□□□□□ -0.97
Smco4Q9JIS3 Gm42929-201ENSMUST00000198374 1286 ntBASIC9□□□□□ -0.97
Smco4Q9JIS3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC9□□□□□ -0.97
Smco4Q9JIS3 Gm7730-201ENSMUST00000212486 454 ntBASIC9□□□□□ -0.97
Smco4Q9JIS3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 AC160929.1-201ENSMUST00000221247 415 ntBASIC9□□□□□ -0.97
Smco4Q9JIS3 AC140293.1-201ENSMUST00000225626 1247 ntBASIC9□□□□□ -0.97
Smco4Q9JIS3 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9□□□□□ -0.97
Smco4Q9JIS3 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms