Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ClpxQ9JHS4 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
ClpxQ9JHS4 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ClpxQ9JHS4 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.43□□□□□ -0.74
ClpxQ9JHS4 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
ClpxQ9JHS4 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
ClpxQ9JHS4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.43□□□□□ -0.74
ClpxQ9JHS4 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.43□□□□□ -0.74
ClpxQ9JHS4 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
ClpxQ9JHS4 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ClpxQ9JHS4 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
ClpxQ9JHS4 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ClpxQ9JHS4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Gm6963-201ENSMUST00000147879 379 ntBASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Gm32999-201ENSMUST00000192693 562 ntBASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Gm37466-201ENSMUST00000195692 652 ntBASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Gm45598-202ENSMUST00000210719 986 ntBASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
ClpxQ9JHS4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Gm14017-201ENSMUST00000121934 386 ntBASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Gm25700-201ENSMUST00000177693 110 ntBASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.41□□□□□ -0.74
ClpxQ9JHS4 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms