Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Gm27023-201ENSMUST00000182372 285 ntBASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Gm37008-201ENSMUST00000195712 319 ntBASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.87□□□□□ -0.67
Ube4bQ9ES00 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.87□□□□□ -0.67
Ube4bQ9ES00 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube4bQ9ES00 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Gm10434-201ENSMUST00000101158 471 ntBASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Gm12058-201ENSMUST00000118614 437 ntBASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Gm18165-201ENSMUST00000217426 928 ntBASIC10.86□□□□□ -0.67
Ube4bQ9ES00 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 AA474408-201ENSMUST00000098110 3339 ntBASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ube4bQ9ES00 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ube4bQ9ES00 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms