Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Gm15131-201ENSMUST00000119124 595 ntBASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Gm15004-201ENSMUST00000119192 630 ntBASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Gm10774-201ENSMUST00000188689 204 ntBASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Gm19459-201ENSMUST00000176240 835 ntBASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Gm19287-201ENSMUST00000203190 358 ntBASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Gm45575-201ENSMUST00000210283 548 ntBASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Gm18065-201ENSMUST00000221395 526 ntBASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tubb3Q9ERD7 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Gm7467-201ENSMUST00000185173 652 ntBASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Mir7686-201ENSMUST00000200604 57 ntBASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Gm43966-201ENSMUST00000203301 612 ntBASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Gm44487-201ENSMUST00000205145 325 ntBASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Gm2553-201ENSMUST00000215986 605 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms