Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Gm12579-201ENSMUST00000118040 783 ntBASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Gm9540-201ENSMUST00000188230 478 ntBASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.59□□□□□ -0.71
Cdc40Q9DC48 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.58□□□□□ -0.71
Cdc40Q9DC48 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Gm14585-201ENSMUST00000120713 634 ntBASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Gm27910-201ENSMUST00000185004 107 ntBASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Gm5982-201ENSMUST00000196234 512 ntBASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Gm9645-201ENSMUST00000197131 792 ntBASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Gm5714-201ENSMUST00000197343 566 ntBASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Gm43186-201ENSMUST00000198130 824 ntBASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Gm8420-201ENSMUST00000097103 598 ntBASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cdc40Q9DC48 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Gm8731-201ENSMUST00000118088 412 ntBASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Gm11500-201ENSMUST00000118237 601 ntBASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Gm23771-201ENSMUST00000178702 110 ntBASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Gm4654-201ENSMUST00000183305 982 ntBASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms