Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rrp8Q9DB85 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rrp8Q9DB85 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Rrp8Q9DB85 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rrp8Q9DB85 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rrp8Q9DB85 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Rrp8Q9DB85 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rrp8Q9DB85 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rrp8Q9DB85 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rrp8Q9DB85 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rrp8Q9DB85 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rrp8Q9DB85 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rrp8Q9DB85 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.15□□□□□ -0.62
Rrp8Q9DB85 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rrp8Q9DB85 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.15□□□□□ -0.62
Rrp8Q9DB85 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rrp8Q9DB85 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Rrp8Q9DB85 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Rrp8Q9DB85 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rrp8Q9DB85 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Rrp8Q9DB85 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
Rrp8Q9DB85 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.15□□□□□ -0.63
Rrp8Q9DB85 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rrp8Q9DB85 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Rrp8Q9DB85 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rrp8Q9DB85 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Rrp8Q9DB85 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Gm6158-201ENSMUST00000109467 904 ntBASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Gm12453-201ENSMUST00000121981 331 ntBASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Gm42430-201ENSMUST00000197209 616 ntBASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Gm42779-201ENSMUST00000198807 406 ntBASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Gm29763-201ENSMUST00000205306 616 ntBASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Rrp8Q9DB85 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm14497-201ENSMUST00000119537 580 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm23400-201ENSMUST00000174994 102 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms